Institut de Mathématiques de Luminy

BIBLIOGRAPHIE - Laurent TICHIT



Année
Publications
Files Type
  Berenguier Duncan, Tichit Laurent, Chaouiya C., Naldi A., Graf T., Thieffry D., Remy Elisabeth.
A compaction of discrete network dynamics emphasizing differentiation decisions.
Submitted, 2012.
  ACTI
2013 Spinelli Lionel, Gambette Philippe, Chapple Charles E., Robisson Benoît, Baudot Anaïs, Garreta Henri, Tichit Laurent, Guénoche Alain, Brun Christine.
Clust&See: a Cytoscape plugin for the identification, visualization and manipulation of network clusters.
Biosystems 113(2):91--5, aug. 2013.
  ACL
  Bérenguier Duncan, Chaouiya Claudine, Monteiro P. T., Naldi Aurélien, Remy Élisabeth, Thieffry Denis, Tichit Laurent.
Dynamical modeling and analysis of large cellular regulatory networks.
Chaos, 23(2), 2013.
PDF ACL
2012 Chaouiya C., Naldi A., Spinelli L, Monteiro P., Berenguier D., Grieco L., Mbodj A., Collombet S., Niarakis A., Tichit Laurent, Remy Elisabeth, Thieffry D.
Logical modelling of cellular decision processes with GINsim.
Conference JOBIM'12, 13th Open Days in Biology, Computer Science and Mathematics. Rennes, June 2012.
PDF ACTN
2011 Engelmann I., Griffon A., Tichit Laurent, Montañana-Sanchez F., Felix M.-A., Reinke V., Waterston R., Hillier L., Ewbank J. J.
A comprehensive analysis of gene expression changes provoked by bacterial and fungal infection in C. elegans.
PLoS One. 2011;6(5):e19055. Epub May 13, 2011.
PDF ACL
  Tichit Laurent, Gambette Philippe, Guénoche Alain.
ModClust: a Cytoscape plugin for modularity- based clustering of networks.
Conference MARAMI 2011. Grenoble, November 2011.
PDF ACTI
2010 Guénoche Alain, Garreta H., Tichit Laurent.
About the largest subtree common to several phylogenetic trees.
Math et Sciences humaines, 190, 2, 5-14,  2010.
PDF ACL
2009 Herrmann Carl, Bérard Sèverine, Tichit Laurent.
SimCT : a generic tool to visualize ontology-based relationships for biological objects.
Bioinformatics 25(23) : 3197-3198, 2009.
PDF ACL
  Gala Nuria, Rey Véronique, Tichit Laurent.
Dispersion sémantique dans des familles morpho-phonologiques : éléments théoriques et empiriques.
Actes de TALN’09 : Traitement Automatique des Langues Naturelles, Senlis, juin 2009.
PDF ACTN
  Guénoche Alain, Garreta H., Tichit Laurent.
About the largest subtree common to several phylogenetic trees.
Proceedings ASMDA'09, Jansen et al. (Eds.), 6--10. 2009.
PDF ACTI
2007

Ouangraoua Aïda, Ferraro Pascal, Tichit Laurent, Dulucq Serge.
Local similarity between quotiented ordered trees.
J. Discrete Algorithms 5 (2007), no. 1, 23--35, 2007.

PDF ACL
2005 Bérard Sèverine, Tichit Laurent, Herrmann Carl.
Cluster Inspector: a tool to visualize ontology-based relationships between biological entities.
Conference JOBIM'05, 6th Open Days in Biology, Computer Science and Mathematics. Lyon, July 2005.
PDF ACTI
2004 Ferraro Pascal, Tichit Laurent, Dulucq Serge.
Local similarity between trees.
Conference JOBIM'04, 5th Open Days in Biology, Computer Science and Mathematics. Montreal, June 2004.
PS ACTI
2003 Dulucq Serge, Tichit Laurent.
RNA secondary structure comparison: exact analysis of the Zhang-Shasha tree edit algorithm.
Theoret. Comput. Sci. 306, no. 1-3, 471--484, 2003.
PS ACL
2001 Dulucq Serge, Tichit Laurent.
Les arbres pour la comparaison de structures secondaires d'ARN.
4th colloquium GASCom'2001 Random Generation of Combinatorial Structures and Bijective Combinatorics, Siena, Italy, pp. 53-58, November 2001.
PS ACTN
  Dulucq Serge, Tichit Laurent.
A propos de la comparaison de structures secondaires d'ARN.
Actes du Colloque JOBIM'01, 2èmes Journées Ouvertes Biologie Informatique Mathématiques, pp. 125-134, Toulouse, juin 2001.
PS ACTN

Thèse
(Thesis)
 
2003 Algorithmics for biological structures: tree edit for RNA secondary structure comparison.
Thèse de doctorat, Université de Bordeaux I , septembre 2003.
PS



Last update : january 20, 2014, EL.