Institut de Mathématiques de Luminy


Files Type
2013 Spinelli Lionel, Gambette Philippe, Chapple Charles E., Robisson Benoît, Baudot Anaïs, Garreta Henri, Tichit Laurent, Guénoche Alain, Brun Christine.
Clust&See: a Cytoscape plugin for the identification, visualization and manipulation of network clusters.
Biosystems 113(2):91--5, aug. 2013.
2012 Glaab Enrico, Baudot Anaïs, Krasnogor Natalio, Schneider Reinhard, Valencia Alfonso.
EnrichNet: network-based gene set enrichment analysis.
Bioinformatics 28 (18), i451--i457, 2012.
  Baudot Anaïs, Souiai Ouissem, Brun Christine.
Network analysis and protein function prediction with the PRODISTIN Web Site.
Bacterial Molecular Networks, Methods in Molecular Biology Volume 804, pp 313--326, 2012.
2011 Tabarés-Seisdedos Rafael, Dumont Nancy, Baudot Anaïs, Valderas José M., Climent Joan,Valencia Alfonso, Crespo-Facorro Benedicto, Vieta Eduard, Gómez-Beneyto Manuel, Martínez Salvador, Rubenstein John L.
No paradox, no progress: inverse cancer comorbidity in people with other complex diseases.
The lancet oncology 12 (6), 604--608, 2011.
2010 Glaab Enrico, Baudot Anaïs, Krasnogor Natalio, Valencia Alfonso.
Extending pathways and processes using molecular interaction networks to analyse cancer genome data.
BMC Bioinformatics 2010, 11:597 (Recomb Computational Cancer Biology Workshop, Oslo, Norway, june 24th-25th, 2010), 2010.
  Baudot Anaïs, de la Torre V, Valencia Alfonso.
Mutated genes, pathways and processes in tumours.
EMBO Report 11(10): 805--810., oct. 2010.
  Pilot Storck Fanny, Chopin Emilie, Rual Jean-François, Baudot Anaïs, Dobrokhotov Pavel, Robinson-Rechavi Marc, Brun Christine, Cusick Michael E., Hill David E., Schaeffer Laurent, Vidal Marc, Goillot Evelyne.
Interactome Mapping of PI3K-mTOR Pathway Identifies DEAF1 as a New GSK3 Interactor.
Molecular and Cellular Proteomics 9(7): 1578--1593. july 2010.
  Glaab Enrico, Baudot Anaïs, Krasnogor Natalio, Valencia Alfonso.
TopoGSA: Gene sets and functional process analysis of network topological properties.
Bioinformatics. 26(9):1271--1272, 1 May 2010.

Baudot Anaïs, Gómez-López Gonzalo, Valencia Alfonso.
Translational disease interpretation with molecular networks.
Genome Biology, 10:221, 2009.

  Baudot Anaïs, Real Francesco X., Izarzugaza José M. G., Valencia Alfonso.
From cancer genomes to cancer models: bridging the gaps.
Embo Report, Apr;10(4):359--366, 2009.
2008 Baudot Anaïs, Brun Christine.
Outils bioinformatiques et ressources pour l'exploitation des données d'interactions protéine-protéine.
Spectra Analysis. 263: 40-45, 2008.
  Baudot A, Angelelli J.B, Guénoche A, Jacq B, Brun C.
Defining a Modular Signalling Network from the Fly Interactome.
BMC Syst Biol. 2(1):45, 2008 May 19.
  Angelelli J.B, Baudot A, Brun C, Guénoche A.
Two local dissimilarity measures for weighted graphs with application to protein interaction networks.
Advances in Data Analysis and Classification. 2:3-16, 2008.
2006 Baudot A, Martin D, Mouren P, Chevenet F, Guénoche A, Jacq B, Brun C.
PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks.
Bioinformatics. 22(2):248-50, 2006 Jan 15.
2004 Brun C, Baudot A, Guénoche A, Jacq B.
The use of protein-protein interaction networks for genome wide protein function comparisons and predictions.
Principles and Practices - Methods in Proteome and Protein Analysis. R.M. Kamp, J.J. Calvete, and T. Choli-Papadopoulou (Eds.), Springer-Verlag Berlin Heidelberg, p103-124, 2004.
  Brun C, Baudot A, Jacq B.
Functional classification of proteins based on protein interaction data.
Encyclopedia of Genomics, Proteomics and Bioinformatics. M. Dunn, L. Jorde, P. Little, S. Subramaniam (Eds), John Wiley & Sons Limited, 3.3, 2004.
  Baudot A, Jacq B, Brun C.
A scale of functional divergence for yeast duplicated genes revealed from analysis of the protein-protein interaction network.
Genome Biology, 2004 5:R76, 2004.

Last update : january 20, 2014, EL.